STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL86155.1R28 protein. (1253 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.881
guaB
Inosine 5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.819
KRL84518.1
R28 protein.
 
0.812
KRL87504.1
Surface protein.
0.804
KRL83568.1
Hypothetical protein.
  
 0.733
KRL83982.1
Hypothetical protein.
  
 0.733
KRL84608.1
Minor capsid protein.
   
 
 0.706
KRL83999.1
Phage capsid family protein.
   
   0.705
KRL85346.1
Mucus binding protein.
 
 
0.667
KRL87113.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
   0.663
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.