STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL87241.1PTS system, mannose-specific IID component. (305 aa)    
Predicted Functional Partners:
KRL87242.1
PTS system mannose-specific transporter subunit IIC.
 0.999
KRL87243.1
PTS system, mannose-specific IIAB component.
 
 0.999
KRL84762.1
PTS system, IIC component.
 0.997
KRL87244.1
PTS system transporter subunit IIB.
 
 0.996
KRL84764.1
Phosphotransferase system sugar-specific EII component.
 
 0.991
KRL83361.1
Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC.
 0.990
KRL87245.1
Mannose PTS, EIIA.
 
 0.989
KRL84761.1
Phosphotransferase system sugar-specific EIIB component.
 
 0.981
KRL87240.1
Hypothetical protein.
 
 
 0.977
KRL87480.1
PTS system, fructose-specific IIABC component.
  
 
 0.975
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.