STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM96327.1Hypothetical protein; Belongs to the UPF0346 family. (74 aa)    
Predicted Functional Partners:
KRM96329.1
Lipase acylhydrolase.
 
  
 0.925
KRM96328.1
Hypothetical protein.
 
   
 0.899
KRM96326.1
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
       0.775
KRM96337.1
Hypothetical protein.
 
     0.746
KRM96587.1
Hypothetical protein.
  
     0.714
KRM96349.1
RibT protein.
  
     0.700
KRM94901.1
Sulfatase family protein.
  
     0.657
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.647
KRM95613.1
Sulfatase family protein.
  
     0.635
cca
Cca-adding enzyme (trna nucleotidyltransferase); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
 
     0.593
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.