STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM96009.1RpiR family transcriptional regulator. (288 aa)    
Predicted Functional Partners:
KRM95375.1
PTS system, trehalose-specific IIBC component.
 
 
 0.932
KRM96795.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.921
KRM96003.1
Beta-glucosides pts, eiibc.
  
 
 0.801
KRM95072.1
PTS system sucrose-specific transporter subunit EIIBC.
  
 
 0.801
KRM96306.1
Hypothetical protein.
 
     0.776
KRM95387.1
Rpir family sialic acid utilization regulator.
  
     0.767
KRM96011.1
Dehydrogenase-like protein.
 
     0.741
KRM95487.1
Transcriptional regulator.
  
     0.597
KRM97582.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.444
KRM96010.1
Ribose 5-phosphate isomerase.
 
     0.417
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.