STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM96093.1Extracellular solute-binding protein. (291 aa)    
Predicted Functional Partners:
KRM96092.1
Polar amino acid ABC transporter inner membrane subunit.
 0.965
KRM95112.1
ABC-type amino acid transport system, pemease component.
 0.908
KRM96091.1
Glutamine glutamate ABC transporter ATP-binding subunit.
 
  0.892
KRM96089.1
PucR family transcriptional regulator.
 
     0.814
KRM97452.1
Amino acid ABC transporter permease.
  0.793
KRM96920.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
  0.776
KRM96921.1
ABC-type amino acid transport permease component.
  0.755
KRM97525.1
Polar amino acid ABC transporter permease.
 
  0.704
KRM95510.1
Glutamine transport system permease.
  0.700
KRM95509.1
Glutamine transport system permease.
 0.679
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.