STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM95565.1Polyribonucleotide nucleotidyltransferase. (129 aa)    
Predicted Functional Partners:
KRM96795.1
Beta-glucosides PTS, EIIBCA.
    
  0.854
KRM95375.1
PTS system, trehalose-specific IIBC component.
    
  0.854
KRM96354.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
  0.832
KRM95566.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
    0.793
KRM94917.1
Hypothetical protein; Belongs to the UPF0374 family.
  
    0.585
KRM95567.1
Thioredoxin reductase.
       0.573
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.477
KRM95568.1
DedA family membrane protein.
       0.450
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.421
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
      
 0.412
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.