STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM95505.1Oligopeptide-binding protein. (540 aa)    
Predicted Functional Partners:
KRM95503.1
Peptide nickel transport system permease protein.
 
 0.998
KRM95504.1
Oligopeptide transport system permease.
 
 0.998
KRM95502.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.983
KRM95501.1
Oligopeptide transport ATP-binding protein.
 
 0.977
KRM95079.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
  
  
 
0.856
KRM95506.1
Hypothetical protein.
       0.556
KRM97437.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
  
  
 
0.400
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
Server load: low (20%) [HD]