STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM97239.1Transcription regulator. (150 aa)    
Predicted Functional Partners:
KRM97077.1
Cysteine desulfurase.
  
 
 0.589
KRM96523.1
Cysteine desulfurase selenocysteine lyase.
  
 
 0.589
KRM97537.1
Cysteine desulfurase.
  
 
 0.589
KRM96870.1
Flagellar motor switch protein G.
    
   0.450
KRM97240.1
ABC transporter, substrate binding protein.
       0.427
KRM97557.1
Hypothetical protein.
  
  
 0.419
KRM97241.1
Abc transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.412
birA
Biotin operon repressor biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.403
Your Current Organism:
Lactobacillus aquaticus
NCBI taxonomy Id: 1423725
Other names: L. aquaticus DSM 21051, Lactobacillus aquaticus DSM 21051
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.