STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40453.1Polar amino acid ABC transporter permease. (213 aa)    
Predicted Functional Partners:
KRK40455.1
Glutamine ABC transporter, substrate binding protein.
 0.996
KRK40454.1
Glutamine ABC transporter, ATP-binding protein.
  0.993
KRK37169.1
ABC superfamily ATP binding cassette transporter ABC protein.
  0.973
KRK34128.1
Phosphate ABC transporter ATP-binding protein.
  0.972
KRK40628.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  0.970
KRK39646.1
ABC-type polar amino acid transport system, ATPase component.
  0.969
KRK37162.1
Phosphate ABC transporter ATP-binding protein.
  0.969
KRK33191.1
Glutamine transport ATP-binding protein.
  0.968
KRK39644.1
Hypothetical protein.
 0.963
KRK33190.1
ABC transporter periplasmic subunit.
 
  0.760
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.