STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40314.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
KRK40316.1
Hypothetical protein.
 
     0.892
KRK40313.1
Histidine protein kinase.
 
  
 0.886
KRK40312.1
Response regulator.
 
 0.863
KRK34664.1
uroporphyrinogen-III C-methyltransferase.
    
  0.857
KRK34361.1
ptsH protein.
    
 0.841
KRK40321.1
Molybdopterin biosynthesis protein MoeB.
 
     0.835
KRK40324.1
Nitrate reductase molybdenum cofactor assembly chaperone.
 
     0.791
KRK40319.1
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.771
KRK40303.1
Hypothetical protein.
  
     0.761
KRK40318.1
Molybdopterin-guanine dinucleotide biosynthesis protein MobB.
 
     0.741
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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