STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40200.1PST family polysaccharide transporter. (471 aa)    
Predicted Functional Partners:
KRK40199.1
UDP-galactopyranose mutase.
 
  
 0.960
KRK40194.1
Glycosyltransferase.
 
  
 0.903
KRK40202.1
Beta-1,6-galactofuranosyltransferase.
 
 
  0.900
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
    
  0.815
KRK40201.1
Glycerol-3-phosphate cytidyltransferase (CDP-glycerol pyrophosphorylase) (teichoic acid biosynthesis protein D).
       0.763
KRK40210.1
Hypothetical protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.731
KRK40193.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.721
KRK40197.1
Glycosyltransferase.
  
 
  0.606
KRK33429.1
Hypothetical protein.
 
  
 0.604
KRK40198.1
CDP-glycerol poly(glycerophosphate) glycerophosphotransferase.
  
    0.588
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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