STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK33450.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
KRK33451.1
Sugar abc transporter, atp-binding protein; Belongs to the ABC transporter superfamily.
       0.483
KRK33452.1
ABC transporter permease.
       0.483
KRK33453.1
SN-glycerol-3-phosphate ABC superfamily ATP binding cassette transporter, membrane protein.
       0.483
KRK33454.1
Glycerol-3-phosphate binding protein.
       0.483
KRK33455.1
Glycerophosphodiester phosphodiesterase family protein.
       0.463
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.