STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)    
Predicted Functional Partners:
KRK40982.1
Phosphotransacetylase.
 
 
 0.984
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.963
KRK40233.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.873
KRK40060.1
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
     
 0.808
KRK39992.1
Hypothetical protein.
     
 0.808
KRK33316.1
Phosphoketolase.
  
 0.684
KRK33320.1
N-acetylglucosamine PTS, EIICBA.
  
  
 0.581
KRK40135.1
Aromatic amino acid aminotransferase.
  
   0.564
KRK40279.1
CcpA transcriptional regulator (catabolic control protein A).
    
 
 0.502
KRK35139.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.486
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
Server load: low (26%) [HD]