hpf protein (Lactobacillus bifermentans) - STRING interaction network

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hpf

30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (183 aa)

Predicted Functional Partners:

rpmC

0.941

rpmH

0.925

rpsI

0.910

rpmA

0.910

rplC

0.908

rpsB

0.907

rpsP

0.907

rpsE

0.907

rplO

0.907

rplI

0.906

Your Current Organism:

Lactobacillus bifermentans

NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hpf	rplC	FC07_GL001481	FC07_GL001589	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.908
hpf	rplI	FC07_GL001481	FC07_GL001286	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.906
hpf	rplO	FC07_GL001481	FC07_GL001608	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.907
hpf	rpmA	FC07_GL001481	FC07_GL002521	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.910
hpf	rpmC	FC07_GL001481	FC07_GL001597	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	Hypothetical protein; Belongs to the universal ribosomal protein uL29 family.	0.941
hpf	rpmH	FC07_GL001481	FC07_GL001262	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.925
hpf	rpsB	FC07_GL001481	FC07_GL000731	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.907
hpf	rpsE	FC07_GL001481	FC07_GL001606	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.907
hpf	rpsI	FC07_GL001481	FC07_GL001625	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.910
hpf	rpsP	FC07_GL001481	FC07_GL000981	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.907
rplC	hpf	FC07_GL001589	FC07_GL001481	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal interface protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.	0.908
rplC	rplI	FC07_GL001589	FC07_GL001286	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.986
rplC	rplO	FC07_GL001589	FC07_GL001608	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.998
rplC	rpmA	FC07_GL001589	FC07_GL002521	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.990
rplC	rpmC	FC07_GL001589	FC07_GL001597	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; Belongs to the universal ribosomal protein uL29 family.	0.995
rplC	rpmH	FC07_GL001589	FC07_GL001262	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family.	0.950
rplC	rpsB	FC07_GL001589	FC07_GL000731	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.988
rplC	rpsE	FC07_GL001589	FC07_GL001606	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.994
rplC	rpsI	FC07_GL001589	FC07_GL001625	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.993
rplC	rpsP	FC07_GL001589	FC07_GL000981	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.986

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