STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40963.1(2Fe-2S)-binding domain protein. (171 aa)    
Predicted Functional Partners:
KRK40961.1
Xanthine dehydrogenase subunit XdhA.
 0.999
KRK40962.1
Xanthine dehydrogenase subunit XdhB.
 0.999
KRK38957.1
Xanthine dehydrogenase subunit XdhA.
 0.997
KRK38956.1
Xanthine dehydrogenase subunit XdhB.
 0.996
KRK33565.1
Hypothetical protein.
 
 
 0.897
KRK33566.1
Aldehyde oxidoreductase.
 
0.859
KRK33567.1
Hypothetical protein.
 
 
 0.859
KRK38949.1
Selenate reductase subunit YgfK.
    
 0.811
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
    
 0.666
KRK32770.1
Aspartate aminotransferase.
 
   
  0.656
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.