STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK32799.1Formate acetyltransferase. (767 aa)    
Predicted Functional Partners:
KRK33300.1
Pyruvate formate-lyase-activating enzyme.
 
 0.951
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
    
 0.950
KRK32800.1
Formate acetyltransferase activating enzyme.
  
 0.944
KRK40233.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.933
KRK40982.1
Phosphotransacetylase.
   
 
 0.899
KRK34235.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.864
KRK38949.1
Selenate reductase subunit YgfK.
    
 0.815
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
   
 
 0.804
KRK33407.1
Putative NAD-dependent formate dehydrogenase, gamma subunit.
   
 
 0.803
KRK35397.1
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.799
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.