STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK32736.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
KRK40142.1
Sorbitol pts, eiibc.
 
 
 0.973
KRK40141.1
pts37C protein.
 
 
  0.971
KRK40143.1
Sorbitol pts, eiia.
  
  
  0.898
KRK40138.1
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.891
KRK34361.1
ptsH protein.
    
  0.878
KRK40140.1
Sorbitol operon activator.
 
  
 0.788
KRK33178.1
Gluconate 5-dehydrogenase.
  
 
  0.662
KRK40092.1
3-oxoacyl-acyl carrier protein reductase.
 
 
  0.660
KRK40251.1
CBS domain-containing protein.
  
     0.630
KRK32737.1
Hypothetical protein.
       0.618
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.