STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK32499.1Transcription regulator. (221 aa)    
Predicted Functional Partners:
KRK32501.1
Cobalt transporter.
 
  
 0.987
KRK32500.1
Cobalt transport protein CbiM.
 
    0.984
KRK32498.1
Hypothetical protein.
 
  
 0.975
KRK32502.1
Cobalt abc transporter, atp-binding protein.
 
  
 0.947
KRK40634.1
Glutamate synthase large subunit.
    
 0.936
KRK32494.1
Hypothetical protein.
 
  
 0.926
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.925
KRK32496.1
Hypothetical protein.
 
  
 0.920
KRK32497.1
Phosphoribosylaminoimidazole carboxylase catalytic subunit.
 
  
 0.911
KRK34235.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.833
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.