STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK32635.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
KRK40285.1
Hypothetical protein.
  
  
 0.779
KRK40287.1
Hypothetical protein.
  
    0.773
KRK32972.1
Signal transduction diguanylate cyclase.
    
   0.588
KRK34147.1
Signal transduction histidine kinase.
   
   0.582
KRK39994.1
Signal transduction histidine kinase.
   
   0.564
KRK39053.1
Two-component system, sensor histidine kinase.
   
   0.564
KRK40104.1
Integral membrane protein.
  
  
 0.540
KRK33370.1
Serine protease HtrA.
  
  
 0.535
KRK32752.1
Two-component system, sensor histidine kinase.
   
   0.526
KRK39500.1
Histidine protein kinase.
   
   0.526
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.