STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK39951.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
KRK39950.1
Hypothetical protein.
 
     0.950
KRK39946.1
Hypothetical protein.
 
     0.946
KRK39947.1
Polyamine transport system, permease.
 
     0.939
KRK39948.1
ABC transporter permease.
 
     0.931
KRK39945.1
Hypothetical protein.
 
     0.927
KRK39944.1
Glutamate synthase subunit small.
 
     0.924
KRK32833.1
Hypothetical protein.
     0.916
KRK39942.1
DedA family protein.
 
     0.865
KRK39949.1
ABC transporter.
 
     0.849
KRK39859.1
Rhodanese-like protein.
 
     0.745
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.