STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40932.1O-methyltransferase family protein. (217 aa)    
Predicted Functional Partners:
KRK40233.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
  0.824
KRK33884.1
Peptidase, U32 family small subunit.
 
  
 0.746
KRK33883.1
U32 family peptidase.
 
  
 0.705
KRK40933.1
CBS domain-containing protein.
  
    0.535
KRK32712.1
Ethanol-active dehydrogenase acetaldehyde-active reductase.
  
 
 0.527
KRK34151.1
single-stranded-DNA-specific exonuclease RecJ.
   
    0.514
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
  0.485
KRK40476.1
Hypothetical protein.
  
     0.481
KRK32737.1
Hypothetical protein.
    
  0.455
KRK34656.1
Oxidoreductase.
  
 
 0.452
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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