STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK39622.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.723
KRK33376.1
Hypothetical protein.
  
     0.710
KRK33373.1
Hypothetical protein.
  
     0.642
KRK33571.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
  0.592
KRK39619.1
Hypothetical protein.
 
    0.509
KRK39620.1
Hypothetical protein.
       0.450
KRK39621.1
Phenazine biosynthesis protein PhzF family.
       0.450
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.