STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK39454.1ABC superfamily ATP binding cassette transporter, ABC protein. (303 aa)    
Predicted Functional Partners:
KRK39453.1
ABC transporter, permease protein.
 
  
 0.987
KRK39452.1
Putative transcription regulator (putative).
 
     0.925
metN
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.918
KRK34646.1
Sulfate-transporting ATPase; Belongs to the ABC transporter superfamily.
 
   
 
0.906
ecfA-2
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
 
0.903
KRK36208.1
ABC transporter ATP-binding protein.
 
     
0.899
KRK39649.1
Glycine betaine L-proline transport ATP binding subunit.
 
     
0.895
KRK39476.1
Hypothetical protein.
    
 0.818
KRK32605.1
ABC-type cobalamin Fe3+-siderophores transport system ATPase component.
   
0.816
KRK39110.1
ABC-2 type transporter.
 
 0.747
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.