STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40889.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
KRK40888.1
Phage protein.
  
   0.926
KRK34372.1
Minor capsid protein.
  
   0.771
KRK40887.1
Hypothetical protein.
       0.752
KRK38977.1
Hypothetical protein.
  
   0.689
KRK34375.1
Hypothetical protein.
  
   0.679
KRK38979.1
Tape measure protein.
  
   0.676
KRK40890.1
TP901 family phage tail tape measure protein.
  
    0.627
KRK34374.1
Hypothetical protein.
   
   0.597
KRK32566.1
LPXTG-motif protein cell wall anchor domain protein.
   
   0.597
KRK40798.1
Hypothetical protein.
   
   0.597
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.