STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40684.1Hypothetical protein. (495 aa)    
Predicted Functional Partners:
KRK33320.1
N-acetylglucosamine PTS, EIICBA.
  
 
 0.818
KRK33207.1
Hypothetical protein.
  
     0.772
KRK34634.1
Hypothetical protein.
  
     0.757
KRK35826.1
Hypothetical protein.
  
     0.732
KRK40878.1
Hypothetical protein.
  
     0.723
KRK40285.1
Hypothetical protein.
  
     0.704
KRK33434.1
Nucleotide NUDIX family hydrolase.
  
     0.704
KRK39242.1
MutT nudix family protein.
  
     0.693
KRK40166.1
Hypothetical protein.
  
     0.679
KRK35026.1
Hypothetical protein.
  
     0.664
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.