STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM72955.1Beta-lactamase family protein. (329 aa)    
Predicted Functional Partners:
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.858
KRM72954.1
Mannose-6-phosphate isomerase, class I; Belongs to the mannose-6-phosphate isomerase type 1 family.
       0.694
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.673
KRM72956.1
Ring-cleavage extradiol dioxygenase.
       0.645
KRM73108.1
Serine-type D-Ala-D-Ala carboxypeptidase.
 
     0.608
KRM72067.1
Serine-type D-Ala-D-Ala carboxypeptidase.
 
     0.583
KRM71772.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.558
KRM72957.1
Flavoprotein.
  
    0.451
KRM71447.1
Pts system protein, trehalose-specific.
  
  
 0.439
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis; Belongs to the aspartate/glutamate racemases family.
    
 0.415
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.