STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM72010.1L-serine dehydratase, beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family. (219 aa)    
Predicted Functional Partners:
KRM72011.1
L-serine ammonia-lyase alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
 
 0.999
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.950
KRM72107.1
Succinate-semialdehyde dehydrogenase (NAD(P)(+)).
   
 
 0.831
dsdA
D-serine dehydratase; Belongs to the serine/threonine dehydratase family. DsdA subfamily.
     
 0.812
KRM71648.1
Cystathionine gamma-synthase.
     
 0.558
KRM71441.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.539
KRM71812.1
Galactoside O-acetyltransferase.
     
 0.537
KRM71537.1
Acetaldehyde dehydrogenase (acetylating); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.525
KRM71534.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein.
    
  0.515
KRM72009.1
PTS system fructose-specific transporter subunit IIABC.
  
  
 0.483
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.