STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM72253.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
KRM72252.1
Hypothetical protein.
       0.562
KRM72251.1
Hypothetical protein.
       0.554
KRM71201.1
Hypothetical protein.
  
 
 0.538
KRM72636.1
Hypothetical protein.
   
   0.534
KRM72739.1
Hypothetical protein.
  
     0.534
KRM71329.1
Hypothetical protein.
  
     0.516
KRM71750.1
Hypothetical protein.
  
     0.514
KRM72254.1
Hypothetical protein.
       0.513
KRM71715.1
Alanine acetyl transferase.
  
     0.512
KRM72398.1
Phosphate acetyltransferase.
    
 0.485
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.