STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM71746.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
KRM72967.1
Hypothetical protein.
  
     0.681
KRM71914.1
Hypothetical protein.
  
     0.572
KRM72444.1
Transcriptional regulator.
  
     0.570
KRM72739.1
Hypothetical protein.
  
     0.525
KRM71747.1
Hypothetical protein.
       0.524
KRM71749.1
Flavodoxin.
 
     0.487
KRM71153.1
Phosphohydrolase.
  
     0.485
KRM71252.1
Hypothetical protein.
  
     0.475
KRM71592.1
Methylase for ubiquinone menaquinone biosynthesis.
  
     0.465
KRM71329.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.