STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM71541.1Thioesterase family protein. (433 aa)    
Predicted Functional Partners:
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.815
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.813
KRM71542.1
Phosphoesterase, DHH family protein.
     
 0.802
cshB
ATP-dependent RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
       0.771
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis; Belongs to the aspartate/glutamate racemases family.
 
  
  0.726
KRM72520.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
  
     0.715
KRM72847.1
Hypothetical protein.
  
     0.686
KRM72356.1
Hypothetical protein.
  
     0.674
dinB
DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
    0.661
KRM72846.1
ATPase-like histidine kinase.
 
     0.637
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.