STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM71263.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
KRM71262.1
Hypothetical protein.
 
 
 0.935
KRM71260.1
Hypothetical protein.
 
     0.909
cinA
Competence damage-inducible protein a; Belongs to the CinA family.
     
 0.807
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.789
KRM71264.1
Hypothetical protein.
       0.773
KRM71151.1
Hypothetical protein.
 
     0.767
KRM71647.1
Cell surface protein.
 
     0.761
KRM72960.1
Cell surface protein.
 
     0.760
KRM72881.1
Hypothetical protein.
  
 0.750
KRM73001.1
Hypothetical protein.
  
 0.750
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.