STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM71330.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
KRM73113.1
Hypothetical protein.
 
     0.761
KRM72019.1
Hypothetical protein.
  
     0.755
KRM72448.1
Hypothetical protein.
  
     0.723
KRM72030.1
Hypothetical protein.
  
     0.672
KRM72994.1
Hypothetical protein.
  
     0.667
KRM71346.1
Hypothetical protein.
  
     0.635
KRM71570.1
Glycerophosphoryl diester phosphodiesterase.
  
     0.627
KRM71587.1
Hypothetical protein.
  
     0.605
KRM72988.1
Glycopeptide antibiotics resistance protein.
  
     0.603
KRM72328.1
Hypothetical protein.
  
     0.598
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.