STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM71367.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KRM72428.1
Hypothetical protein.
  
     0.595
KRM71798.1
Hypothetical protein.
  
     0.576
KRM72062.1
Hypothetical protein.
  
     0.489
KRM71364.1
Threonine Serine Exporter.
       0.466
KRM71365.1
Hypothetical protein.
       0.466
KRM71366.1
Hypothetical protein.
       0.466
KRM72063.1
NlpC P60 family protein.
  
     0.457
KRM72169.1
Glycoside hydrolase family 25.
  
     0.453
KRM73037.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.