STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM91948.1Spermidine putrescine ABC transporter substrate-binding protein. (348 aa)    
Predicted Functional Partners:
KRM91949.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
 
 0.991
KRM91951.1
Hypothetical protein.
 
 
 0.989
KRM91950.1
Hypothetical protein.
 
 
 0.974
ade
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
    0.936
potA
Spermidine putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.889
KRM91976.1
Spermidine putrescine ABC transporter permease.
 
 
 0.886
KRM90794.1
Hypothetical protein.
 
 
 0.882
KRM90791.1
Hypothetical protein.
 
 
 0.724
KRM91975.1
Spermidine putrescine ABC transporter permease.
 
 
 0.717
KRM90792.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
 
 0.645
Your Current Organism:
Lactobacillus cacaonum
NCBI taxonomy Id: 1423729
Other names: L. cacaonum DSM 21116, Lactobacillus cacaonum DSM 21116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.