STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM90916.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
KRM91520.1
Hypothetical protein.
  
 
 0.935
KRM90166.1
Hypothetical protein.
  
     0.674
KRM92734.1
Glutamate synthase large subunit.
     
 0.649
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.644
KRM91017.1
Cysteine synthase.
  
  
 0.626
KRM92726.1
Hypothetical protein.
  
     0.596
KRM89893.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.585
KRM90914.1
Hypothetical protein.
 
  
 0.562
KRM91578.1
Metallophosphoesterase; Belongs to the 5'-nucleotidase family.
 
  
  0.560
KRM90278.1
Hypothetical protein.
  
     0.559
Your Current Organism:
Lactobacillus cacaonum
NCBI taxonomy Id: 1423729
Other names: L. cacaonum DSM 21116, Lactobacillus cacaonum DSM 21116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.