STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM91100.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
KRM91101.1
Hypothetical protein.
 
     0.966
KRM91099.1
Hypothetical protein.
 
     0.962
KRM89937.1
Cro CI family transcriptional regulator.
  
     0.769
KRM91899.1
Hypothetical protein.
  
     0.768
KRM90594.1
Hypothetical protein.
  
     0.763
KRM89940.1
Hypothetical protein.
  
     0.762
KRM91912.1
Hypothetical protein.
  
     0.760
KRM90825.1
Hypothetical protein.
  
     0.749
KRM90961.1
Transcriptional regulator.
  
     0.743
KRM90745.1
Transcription regulator.
  
     0.735
Your Current Organism:
Lactobacillus cacaonum
NCBI taxonomy Id: 1423729
Other names: L. cacaonum DSM 21116, Lactobacillus cacaonum DSM 21116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.