STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM92754.1Citrate transporter. (318 aa)    
Predicted Functional Partners:
citD
Citrate lyase subunit gamma; Covalent carrier of the coenzyme of citrate lyase.
       0.715
KRM92753.1
Malic enzyme.
  
  
 0.711
KRM92755.1
acetate-SH-citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
       0.705
KRM92757.1
Citrate lyase, beta chain; Belongs to the HpcH/HpaI aldolase family.
       0.705
KRM92758.1
Citrate lyase alpha chain.
       0.705
KRM92164.1
Hypothetical protein.
  
     0.589
citG
CitXG protein.
 
     0.555
KRM92760.1
Halo peroxidase.
       0.474
KRM92703.1
Malate dehydrogenase.
  
  
 0.412
KRM89983.1
Malate dehydrogenase.
  
  
 0.412
Your Current Organism:
Lactobacillus cacaonum
NCBI taxonomy Id: 1423729
Other names: L. cacaonum DSM 21116, Lactobacillus cacaonum DSM 21116
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