STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25498.1SAM-dependent methyltransferase. (246 aa)    
Predicted Functional Partners:
KRN25496.1
Hypothetical protein.
 
     0.860
KRN25497.1
Membrane protein.
 
     0.856
KRN23074.1
Hypothetical protein.
  
     0.764
KRN23346.1
Hypothetical protein.
  
     0.735
KRN25862.1
Hypothetical protein.
  
     0.721
KRN23332.1
Universal stress protein.
  
     0.706
KRN18647.1
Hypothetical protein.
  
     0.691
KRN25549.1
tPR repeats containing protein.
  
     0.665
KRN25913.1
Hypothetical protein.
  
     0.629
KRN25499.1
Metal-sulfur cluster biosynthetic protein.
       0.621
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.