STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25331.1Alanine acetyl transferase (YoaA protein). (189 aa)    
Predicted Functional Partners:
KRN25332.1
Hypothetical protein.
       0.773
KRN22220.1
GTP cyclohydrolase I.
  
     0.752
KRN25323.1
Hypothetical protein.
 
     0.734
KRN24864.1
Hypothetical protein.
  
     0.710
KRN25873.1
Hypothetical protein.
  
     0.710
KRN23588.1
Phosphohydrolase.
 
     0.650
KRN22224.1
Hypothetical protein.
  
     0.638
KRN18725.1
Hypothetical protein.
  
     0.597
KRN24476.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
     0.581
KRN18741.1
Hypothetical protein.
   
   0.551
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.