STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25243.1Phage terminase-small subunit. (156 aa)    
Predicted Functional Partners:
KRN25244.1
Prophage Lp3 protein 15.
 
    0.962
KRN25246.1
Capsid protein.
 
   
 0.950
KRN25245.1
Portal protein.
 
  
 0.948
KRN25239.1
Phage-related DNA replication protein.
 
     0.780
KRN25240.1
Phage-related virulence-associated protein E.
 
     0.730
KRN25235.1
Site-specific recombinase; Belongs to the 'phage' integrase family.
  
   
 0.658
KRN19470.1
Lactocepin.
  
     0.512
KRN25247.1
Bacteriophage DNA packaging protein.
       0.440
KRN18155.1
Amidohydrolase 2.
  
     0.410
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.