STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN22090.1Hypothetical protein. (1086 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.896
cinA
Competence damage-inducible protein cinA; Belongs to the CinA family.
    
  0.893
KRN22088.1
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
     0.775
KRN18824.1
Transposase.
  
     0.670
KRN22094.1
Family 36 glycoside hydrolase.
 
     0.648
KRN18162.1
Protein SipR.
  
     0.644
KRN18164.1
Hypothetical protein.
  
     0.636
KRN22087.1
Glucuronyl hydrolase.
 
     0.584
KRN22086.1
PTS system mannose fructose-specific iid component.
 
     0.582
KRN18161.1
Hypothetical protein.
  
     0.563
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.