STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25874.1Hydrolase of the HAD superfamily protein. (270 aa)    
Predicted Functional Partners:
KRN25875.1
Aldo keto reductase.
  
    0.792
KRN21658.1
Hydrolase, had superfamily, cof family.
  
 
 
0.717
KRN25220.1
HAD superfamily hydrolase.
 
 
 
0.681
KRN23301.1
Amylopullulanase.
  
 
 0.608
KRN22006.1
Neopullulanase.
  
 
 0.608
KRN19138.1
HAD superfamily hydrolase.
 
 
 
0.597
KRN25387.1
Hypothetical protein.
 
 
 
0.594
KRN22234.1
Riboflavin biosynthesis protein ribf; Belongs to the ribF family.
   
 0.592
KRN25615.1
Cof-like hydrolase family protein.
 
 
 
0.566
KRN25873.1
Hypothetical protein.
       0.565
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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