STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25855.1Pyridoxine 5-phosphate oxidase V-like favin-nucleotide-binding protein. (134 aa)    
Predicted Functional Partners:
KRN25858.1
Flavodoxin.
 
     0.649
KRN25856.1
Hypothetical protein.
       0.601
KRN25857.1
Hypothetical protein.
       0.601
KRN25077.1
Hypothetical protein.
  
     0.510
KRN25864.1
FAD(NAD)-dependent oxidoreductase.
  
     0.509
KRN22280.1
Membrane associated subtilisin-like serine protease.
  
     0.480
KRN25065.1
Acyltransferase 3.
  
     0.477
KRN25083.1
Hypothetical protein.
  
     0.445
KRN25115.1
Hypothetical protein.
 
     0.435
KRN22714.1
Membrane protein.
  
     0.403
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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