STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN21272.1Collagen adhesion protein. (1030 aa)    
Predicted Functional Partners:
KRN21274.1
Conjugative transposon protein.
 
     0.864
KRN21275.1
Conjugative transposon protein.
 
     0.782
KRN18295.1
Conjugative transposon membrane protein.
  
     0.774
KRN18721.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.745
KRN24443.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.745
KRN18913.1
Conjugative transposon protein.
  
     0.740
KRN21273.1
Hypothetical protein.
       0.713
KRN23257.1
Integrase; Belongs to the 'phage' integrase family.
  
  
 0.709
KRN18852.1
Hypothetical protein.
  
     0.653
KRN18298.1
Conjugative transposon protein.
  
    0.599
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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