STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN25700.1Short-chain dehydrogenase reductase SDR. (250 aa)    
Predicted Functional Partners:
KRN25701.1
Fumarate reductase.
 
 0.932
KRN25699.1
Fumarate reductase (flavoprotein).
 
     0.918
KRN19106.1
PTS system beta-glucoside-specific EIIBCA component.
     
 0.851
KRN24485.1
PTS system, IIBC component.
     
 0.851
KRN23261.1
Sucrose PTS, EIIBCA.
     
 0.851
KRN21491.1
Beta-glucoside-specific pts system iiabc component.
     
 0.851
KRN21407.1
Beta-glucoside-specific phosphotransferase system (PTS), IIABC component.
     
 0.851
KRN25363.1
Hypothetical protein.
  
 0.825
KRN23038.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.825
KRN22513.1
Acyl transferase region.
 
 0.818
Your Current Organism:
Lactobacillus camelliae
NCBI taxonomy Id: 1423730
Other names: L. camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae DSM 22697, Lactobacillus camelliae DSM 22697 = JCM 13995, Lactobacillus camelliae JCM 13995, Lactobacillus camelliae JCM 13995 = DSM 22697
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.