STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL02606.1Exopolysaccharide chain length regulator. (253 aa)    
Predicted Functional Partners:
KRL02605.1
Tyrosine-protein kinase.
 
 0.997
KRL01726.1
Phosphotyrosine-protein phosphatase.
 
 
 0.966
KRL02607.1
Bacterial sugar transferase family protein.
 
  
 0.868
KRL02143.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.725
KRL02608.1
LytR family transcriptional regulator.
 
  
 0.674
KRL02604.1
Hypothetical protein.
 
     0.664
KRL02131.1
MOP superfamily flippase transporter.
 
  
 0.545
KRL00465.1
LytR family transcriptional regulator.
 
  
 0.526
KRL02712.1
VanZ family protein.
 
     0.524
KRL02603.1
Glycosyltransferase.
  
  
 0.475
Your Current Organism:
Lactobacillus capillatus
NCBI taxonomy Id: 1423731
Other names: L. capillatus DSM 19910, Lactobacillus capillatus DSM 19910
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.