STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL02615.1Amino acid transporter. (447 aa)    
Predicted Functional Partners:
KRL02614.1
Cyclase.
 
     0.911
KRL02616.1
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase.
 
  
  0.722
KRL02435.1
Oligo-1,6-glucosidase.
   
  0.516
KRL02442.1
Oligo-1,6-glucosidase.
   
  0.516
KRL01742.1
Alpha-glucosidase.
   
  0.516
KRL01340.1
Trehalose-6-phosphate hydrolase.
   
  0.516
KRL00901.1
Trehalose-6-phosphate hydrolase.
   
  0.516
KRL03544.1
Alpha,alpha-phosphotrehalase.
   
  0.516
KRL01345.1
Hypothetical protein.
    
 0.412
KRL02613.1
Glyoxal reductase.
       0.409
Your Current Organism:
Lactobacillus capillatus
NCBI taxonomy Id: 1423731
Other names: L. capillatus DSM 19910, Lactobacillus capillatus DSM 19910
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.