STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL02514.1Phage terminase, small subunit, P27 family. (156 aa)    
Predicted Functional Partners:
KRL02515.1
Terminase large subunit.
 
    0.968
KRL02516.1
HK97 family phage portal protein.
 
    0.904
KRL02512.1
Restriction endonuclease.
 
    0.899
KRL02518.1
HK97 family phage major capsid protein.
 
     0.890
KRL02517.1
ATP-dependent Clp protease, protease subunit.
 
    0.885
KRL02522.1
Phage major tail protein.
 
     0.847
KRL02521.1
Phage tail protein.
 
     0.844
KRL02520.1
Hypothetical protein.
 
     0.839
KRL02525.1
Tape measure protein.
 
     0.831
KRL02981.1
Phage-related head-tail joining protein.
 
     0.807
Your Current Organism:
Lactobacillus capillatus
NCBI taxonomy Id: 1423731
Other names: L. capillatus DSM 19910, Lactobacillus capillatus DSM 19910
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.