STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL01212.1Carboxy-terminal processing protease; Belongs to the peptidase S41A family. (486 aa)    
Predicted Functional Partners:
KRL01268.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.935
KRL01213.1
Hypothetical protein; Belongs to the UPF0346 family.
       0.774
KRL01214.1
Hypothetical protein.
     
 0.685
KRL01215.1
Lipase acylhydrolase.
       0.683
KRL00889.1
D-alanyl-d-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 0.656
KRL02484.1
Transcriptional regulator.
  
    0.649
KRL03352.1
Hypothetical protein.
  
 
 0.592
metG
methionyl-tRNA synthetase protein secretion chaperonin CsaA; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
   
   0.569
KRL02002.1
Surface antigen.
     
 0.550
KRL00486.1
Membrane alanine aminopeptidase.
    
 0.540
Your Current Organism:
Lactobacillus capillatus
NCBI taxonomy Id: 1423731
Other names: L. capillatus DSM 19910, Lactobacillus capillatus DSM 19910
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.