Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRL03594.1 | KRL03595.1 | FC81_GL001850 | FC81_GL001851 | cAMP-binding protein. | Hypothetical protein. | 0.974 |
KRL03594.1 | KRL03596.1 | FC81_GL001850 | FC81_GL001852 | cAMP-binding protein. | NCAIR mutase (PurE)-related protein. | 0.906 |
KRL03594.1 | KRL03598.1 | FC81_GL001850 | FC81_GL001854 | cAMP-binding protein. | PP family ATPase. | 0.938 |
KRL03594.1 | KRL03599.1 | FC81_GL001850 | FC81_GL001855 | cAMP-binding protein. | Glycerol uptake facilitator related permease (major Intrinsic protein family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.718 |
KRL03594.1 | larC | FC81_GL001850 | FC81_GL001853 | cAMP-binding protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.912 |
KRL03594.1 | rpmF | FC81_GL001850 | FC81_GL001856 | cAMP-binding protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.490 |
KRL03595.1 | KRL03594.1 | FC81_GL001851 | FC81_GL001850 | Hypothetical protein. | cAMP-binding protein. | 0.974 |
KRL03595.1 | KRL03596.1 | FC81_GL001851 | FC81_GL001852 | Hypothetical protein. | NCAIR mutase (PurE)-related protein. | 0.985 |
KRL03595.1 | KRL03598.1 | FC81_GL001851 | FC81_GL001854 | Hypothetical protein. | PP family ATPase. | 0.988 |
KRL03595.1 | KRL03599.1 | FC81_GL001851 | FC81_GL001855 | Hypothetical protein. | Glycerol uptake facilitator related permease (major Intrinsic protein family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.782 |
KRL03595.1 | larC | FC81_GL001851 | FC81_GL001853 | Hypothetical protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.984 |
KRL03595.1 | rpmF | FC81_GL001851 | FC81_GL001856 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.440 |
KRL03595.1 | rpmG | FC81_GL001851 | FC81_GL001857 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.425 |
KRL03595.1 | rpsN | FC81_GL001851 | FC81_GL001858 | Hypothetical protein. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.425 |
KRL03596.1 | KRL03594.1 | FC81_GL001852 | FC81_GL001850 | NCAIR mutase (PurE)-related protein. | cAMP-binding protein. | 0.906 |
KRL03596.1 | KRL03595.1 | FC81_GL001852 | FC81_GL001851 | NCAIR mutase (PurE)-related protein. | Hypothetical protein. | 0.985 |
KRL03596.1 | KRL03598.1 | FC81_GL001852 | FC81_GL001854 | NCAIR mutase (PurE)-related protein. | PP family ATPase. | 0.997 |
KRL03596.1 | KRL03599.1 | FC81_GL001852 | FC81_GL001855 | NCAIR mutase (PurE)-related protein. | Glycerol uptake facilitator related permease (major Intrinsic protein family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.784 |
KRL03596.1 | larC | FC81_GL001852 | FC81_GL001853 | NCAIR mutase (PurE)-related protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.992 |
KRL03596.1 | nnrD | FC81_GL001852 | FC81_GL000139 | NCAIR mutase (PurE)-related protein. | Sugar kinase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. | 0.474 |
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